Michael Zhang

Zhang is a part of this research project: Genomics of Transcriptional Regulation. The site seems a bit old, but it has some software related to gene regulatory networks.

Here are some of the papers from his publications list:

1. Zhang MQ (2005) Inferring Gene Regulatory Networks - Chapter 21 in: Bioinformatics - From Genomes to Therapies (T. Lengauer, ed.) Wiley-VCH – in press.
2. Banerjee N, Zhang MQ (2002) Functional Genomics as Applied to Mapping Transcription Regulatory Networks
   
   • 5 pages
   • survey of the recent happenings for gene transcription regulatory experiments
   • experiments on the yeast cell
   • concentrates on cis-regulatory elements
   • discusses clustering approaches to classify certain genes
     
   • Bayesian networks are discussed in reference to Friedman
3. Banerjee N and Zhang MQ (2005) Transcription Regulatory Networks in Yeast Cell Cycle - Chapter in: Microarray Expression Profiling and Transcriptional Regulatory Networks (F Shannon and S Rao, eds.) In Press.
   
   • 12 pages
   • this seems like a more mature version of the paper above